PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000766.1_g120.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 170aa    MW: 19837.1 Da    PI: 10.1987
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000766.1_g120.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.62.1e-5211311128
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyatgkrknratksg 81 
                                + pGfrFhPtdeelv +yL++k++++ l++ e ik+vdiyk++PwdLp k   ++++ekewyf+++rd+ky+++ r+nr+t +g
  Pav_sc0000766.1_g120.1.mk   1 MLPGFRFHPTDEELVGFYLRRKIQQRLLPI-ELIKQVDIYKYDPWDLPsKaeLASTGEKEWYFYCPRDRKYRNSARPNRVTGAG 83 
                                579***************************.89**************953544455889************************* PP

                        NAM  82 yWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                +Wkatg+d++++s+ +++ +glkk+Lvfy+gra kg ktdW+mhe+rl
  Pav_sc0000766.1_g120.1.mk  84 FWKATGTDRPIYSSeGSKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRL 131
                                *************956677***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MLPGFRFHPT DEELVGFYLR RKIQQRLLPI ELIKQVDIYK YDPWDLPSKA ELASTGEKEW  60
YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSEGS KCIGLKKSLV FYRGRAAKGI  120
KTDWMMHEFR LPSLSESAPP PKKLLDKSLP ANVSLRYFFP LFVFQLCFGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.18e-84NAC family protein