PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000823.1_g230.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 217aa MW: 25399.6 Da PI: 6.1374

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000823.1_g230.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	61.1	3.5e-19	33	119	2	95
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85 pG+rFhPtdeelv +yL++kve+k+++l e ik +diyk++PwdLp+ +e++ ++ k+ ++ + r+ ++ W++ Pav_sc0000823.1_g230.1.mk 33 LPGYRFHPTDEELVRFYLRRKVENKPIRL-ELIKLIDIYKYDPWDLPNIW----HEVWTLCRILKRDNN--YSCRKY-ASNWHK 108 69*************************.89*************332....233344443333322..334443.356886 PP NAM 86 tgk.dkevlsk 95 t + k++++ Pav_sc0000823.1_g230.1.mk 109 TTSnPKQIVAD 119 65426777764 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MDQKTPRGRN YTEMEVQKMM SDSNNIKEDA NFLPGYRFHP TDEELVRFYL RRKVENKPIR 60 LELIKLIDIY KYDPWDLPNI WHEVWTLCRI LKRDNNYSCR KYASNWHKTT SNPKQIVADS 120 SSKPCSPESD ISFGALAANK DQFERSPIFY NGHMYEGNRF SAGDQLSLKG EVDPMGNSYI 180 SFSNPKEDEM LTSDGNWDEL RPMVDCVLNP SLLYSCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	1e-22	NAC family protein