PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000832.1_g280.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 572aa MW: 63265 Da PI: 6.9023

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000832.1_g280.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.4	1.4e-27	235	289	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+aveqL G +kA+P++ilelm++++Lt+++++SHLQkYR++ Pav_sc0000832.1_g280.1.mk 235 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILELMGIDCLTRHNIASHLQKYRSH 289 5689***************.******************************86 PP
2	Myb_DNA-binding	39	1.9e-12	238	287	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg +t+ ++ s++qky+ Pav_sc0000832.1_g280.1.mk 238 VDWTPELHRRFVQAVEQLGVDkaVPSRILELMGiDCLTRHNIASHLQKYR 287 57******************************889**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 572 aa Download sequence
MLILSPLRDG HHQLKEEKQL GGGGRDEGEV EGFDFNGGNS VGSAGLDFPD FSGGMGNLLD 60 SIDFDDLFIG IHDGDVLPDL EMDSEILDFA AHRDHGDAYY HNNAKTTLSK VEDQEEEEEE 120 EEEGKDLDLV RAAADSLTTA TTTRNNQNYS SSSNTSTTTT SATQDQDRDG GHEEIGSKGD 180 SNSNINNNIS QIRASQHEQN QLLNQSSSPK ESADQKLARK SSSTAQSKNS HGKRKVKVDW 240 TPELHRRFVQ AVEQLGVDKA VPSRILELMG IDCLTRHNIA SHLQKYRSHR KHLLAREAEA 300 ASWTQRRQIY GAAAVSGGGG GGGGGGGKSS RRDVMMMNSP NWLNAPTMGF PPIPSPTPPP 360 MHRHHHHHHH HHHHHHHHHH HHHHHHHHHH HHHHHQMIRP LHVWGHPSMD QSMMHMWPKH 420 LPHNFPSPIP PPLPPAHAWP PPPPPPSDAS YWHHPPPHHQ RVPNALTPGT PCFPRQLATT 480 TQQRFPTPPI PGIPPHAVYK VDPGIAVPSP QSGPHPLVDD FHPSNESIDA AIGDVLSKPW 540 LPLPLGLRPP ATDSVMVELQ RQGIPKIPPS CA

Sequence ? help Back to Top

Protein Sequence Length: 572 aa Download sequence

MLILSPLRDG HHQLKEEKQL GGGGRDEGEV EGFDFNGGNS VGSAGLDFPD FSGGMGNLLD  60
SIDFDDLFIG IHDGDVLPDL EMDSEILDFA AHRDHGDAYY HNNAKTTLSK VEDQEEEEEE  120
EEEGKDLDLV RAAADSLTTA TTTRNNQNYS SSSNTSTTTT SATQDQDRDG GHEEIGSKGD  180
SNSNINNNIS QIRASQHEQN QLLNQSSSPK ESADQKLARK SSSTAQSKNS HGKRKVKVDW  240
TPELHRRFVQ AVEQLGVDKA VPSRILELMG IDCLTRHNIA SHLQKYRSHR KHLLAREAEA  300
ASWTQRRQIY GAAAVSGGGG GGGGGGGKSS RRDVMMMNSP NWLNAPTMGF PPIPSPTPPP  360
MHRHHHHHHH HHHHHHHHHH HHHHHHHHHH HHHHHQMIRP LHVWGHPSMD QSMMHMWPKH  420
LPHNFPSPIP PPLPPAHAWP PPPPPPSDAS YWHHPPPHHQ RVPNALTPGT PCFPRQLATT  480
TQQRFPTPPI PGIPPHAVYK VDPGIAVPSP QSGPHPLVDD FHPSNESIDA AIGDVLSKPW  540
LPLPLGLRPP ATDSVMVELQ RQGIPKIPPS CA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	1e-67	G2-like family protein