PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000852.1_g460.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 364aa MW: 39625.9 Da PI: 9.8711

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000852.1_g460.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.3	2.3e-31	292	349	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s+ gC ++k+ver+ +dp+++++tYeg+Hnh+ Pav_sc0000852.1_g460.1.mk 292 DDYSWRKYGQKPIKGSPHPRGYYKCSSQrGCLARKHVERALDDPTMLIVTYEGDHNHS 349 99**********************999**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MAVELMMGFI DSFAAQMEEN AVKEAASAGI QSVEKFISLI SQHHHQFQDS SFSSSSNPEA 60 ATEYKAVADM AVTKFRKVIS LLDKGRTGHA RFRRAPVTPS PPPPPPPPQN TETQIPRPSI 120 QEPHNPKTDQ PPGFKTEQSS AFKVYCPTPS VRLPPLPHNP HLKTTPVVLT KSVGCAERKL 180 DAPTTINFSP SPSISAANSF MSSLTTGDGE GSVQHSMSSG FQFTNMSQSS SGKPPLSSSS 240 LKRKCNSMDD VAALRCGSSS GRCHCSKKRK SKVKRVVRVP AISMKMADIP PDDYSWRKYG 300 QKPIKGSPHP RGYYKCSSQR GCLARKHVER ALDDPTMLIV TYEGDHNHSH SVTDPTPALV 360 LESS

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MAVELMMGFI DSFAAQMEEN AVKEAASAGI QSVEKFISLI SQHHHQFQDS SFSSSSNPEA  60
ATEYKAVADM AVTKFRKVIS LLDKGRTGHA RFRRAPVTPS PPPPPPPPQN TETQIPRPSI  120
QEPHNPKTDQ PPGFKTEQSS AFKVYCPTPS VRLPPLPHNP HLKTTPVVLT KSVGCAERKL  180
DAPTTINFSP SPSISAANSF MSSLTTGDGE GSVQHSMSSG FQFTNMSQSS SGKPPLSSSS  240
LKRKCNSMDD VAALRCGSSS GRCHCSKKRK SKVKRVVRVP AISMKMADIP PDDYSWRKYG  300
QKPIKGSPHP RGYYKCSSQR GCLARKHVER ALDDPTMLIV TYEGDHNHSH SVTDPTPALV  360
LESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24240.1	9e-80	WRKY family protein