PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000862.1_g130.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 193aa    MW: 21682.1 Da    PI: 5.1343
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000862.1_g130.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.41.8e-0918412448
                               HHHHHHHHTTTS-HHHHHHHHHHHT CS
            Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48
                               W++Iar+++ gRt++++k++w++++
  Pav_sc0000862.1_g130.1.mk 18 WSRIARKLP-GRTDNEIKNYWRTHM 41
                               *********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MSNVQYSDSL TCCVVRLWSR IARKLPGRTD NEIKNYWRTH MRKKAQEKKR AASPSSSSSH  60
CSSSSNITST EGGASFYDTG GLEIKASSGA KKTGGDHQEQ EDEKKRDQKE YSLDDIWKDI  120
NLPEVNSIEP VYNGYSEEAC NIISCPLMAS PAPWEYCPDS LWKMDEEESK MFLPTTSDQF  180
LSCFEYGKAS LTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.24e-37MYB_related family protein