PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000877.1_g140.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 174aa    MW: 19320.7 Da    PI: 4.3509
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000877.1_g140.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.75.8e-051231531954
                                HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                        HLH  19 afeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                +f  Lr ++P+       +++Ka+ L  Av YI++L
  Pav_sc0000877.1_g140.1.br 123 RFYALRAVVPNV-----SRMDKASLLSDAVSYINEL 153
                                677899999995.....49***************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MHGFQTLVCI PTPTGVLEIG SSDSIRENWS LVQQAKSLFG SDFICSVADL ETRSPIDFIN  60
RNFSFADIGI IAGIEEEEDD KKEVALDLTM MKRKGGNPGT GLYPDPNSNP KPDYSDFDSG  120
PQRFYALRAV VPNVSRMDKA SLLSDAVSYI NELKTKMDEL EGIGFDREEG KQRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00870.18e-23bHLH family protein