PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000877.1_g1840.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 152aa MW: 17546.5 Da PI: 7.2719

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000877.1_g1840.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	67	5.6e-21	3	117	22	128
NAM 22 kvegkkleleevikevd...iykvePwdLpkkvkaeekewyfFskrdkkya....tgkrknratk..sgyWkatgkdkevlsk 95 kv +++++++e+i+++d y+++P++L +++ +e+ew+fF+++d ++ +g+r+ r++ g+Wk g++++++++ Pav_sc0000877.1_g1840.1.mk 3 KVFHRPVPAAEAIQDIDatqFYSTHPKNLV-TFSCGEREWFFFIHEDDENCsasaQGRRNIRVVGngVGFWKPNGSENPIHNE 84 56666666656666654333999****6.777899**999987763333566666655534788********* PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g++ k L++++g+ +k++kt+W m ey+l Pav_sc0000877.1_g1840.1.mk 85 DGNVYASKIFLTYFSGSLRKAKKTHWKMVEYHL 117 ******************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 152 aa Download sequence
MNKVFHRPVP AAEAIQDIDA TQFYSTHPKN LVTFSCGERE WFFFIHEDDE NCSASAQGRR 60 NIRVVGNGVG FWKPNGSENP IHNEDGNVYA SKIFLTYFSG SLRKAKKTHW KMVEYHLHSD 120 SHTEEEYQVL DAVQRREWVL GQLKRGNAYN GL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	3e-13	NAC family protein