PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000886.1_g620.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 198aa    MW: 22228.8 Da    PI: 6.4231
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000886.1_g620.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding301.2e-091443130
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIart 30
                               +g W++eEde+l+++++ +G g+W+++++ 
  Pav_sc0000886.1_g620.1.mk 14 KGLWSPEEDEKLIRYITTYGHGCWRKVPEQ 43
                               678************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MGHHYCCKQR KVKKGLWSPE EDEKLIRYIT TYGHGCWRKV PEQADFVNQN FMIKPRDQTL  60
YSSPFPLLMF DAASADDIQA NNISAQAAEH FPIGVSNSKN GTWILDQQQH HHQVQALPSS  120
ASPFTNNNMD AHSLPAPVGP AIGNNNMVPI EVESCSNMNK EGEISMECLQ SSTQELNALV  180
HCRQAQHCSS SSFHFWDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63910.12e-21MYB family protein