PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000886.1_g770.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 314aa    MW: 35398.8 Da    PI: 4.8611
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000886.1_g770.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.29.3e-30129186258
                                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
                       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                                +D ++WrKYGqK++kgs++prsYYrC+s+ gC+++k+vers ++p++++itY+ eHnh
  Pav_sc0000886.1_g770.1.mk 129 SDVWAWRKYGQKPIKGSPYPRSYYRCSSSkGCSARKQVERSCSNPETFIITYTAEHNH 186
                                79*************************998**************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MENWDLQAVV RGCNTTANID EAMENSQIPY CFAPLSIEEE DDFFHALPQL FEATAALDEL  60
EELYKPFYPV LQPSTPPIIL AASVSVPQEA ITVEVPKKLK ESSTICKKIR RKNQSKRVVK  120
QVKAEDLFSD VWAWRKYGQK PIKGSPYPRS YYRCSSSKGC SARKQVERSC SNPETFIITY  180
TAEHNHVHPT RRNSLAGSTR SKFPSSKNKD KCKSSLNSPA MTNLAASIEE DHDVQSASTN  240
TVKEEAQLLL EEDEIGHENV MLDVVLSDEM IPSLEDLDRE LEPVMDGWFL DQFSENFPSP  300
WFNIGHSNTV TGAC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23550.19e-41WRKY family protein