PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000890.1_g500.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 327aa    MW: 36551.1 Da    PI: 7.8542
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000890.1_g500.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.81.1e-28172231159
                                ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                ++Dgy+WrKYGqK+ ++++ pr+YY+C++a +Cpvkkkv++sae+p v++ tYegeHnh 
  Pav_sc0000890.1_g500.1.mk 172 VKDGYQWRKYGQKVTRDNPSPRAYYKCSFApNCPVKKKVQKSAENPCVLVATYEGEHNHM 231
                                58***************************99****************************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MDSEWVNTSL GLNVIPFHPA SDDQAPVKKQ LELEGDYAKV FEGHASVKQE AAASHVLTEE  60
LNRISLENKK LTEMLAALCE NYTNLQSHVK ELMITKQQSS DQNDLATNFN KKRKPDSEDY  120
SNMIGLTSPG TNTETSSISD EEYPCKRPKE NINLKISRVY VRTEASDTRL IVKDGYQWRK  180
YGQKVTRDNP SPRAYYKCSF APNCPVKKKV QKSAENPCVL VATYEGEHNH MHPETRAEVT  240
LIGSISPNQQ LSPLSPSMAK RTSPVPTFSC DKNNKLSPRE IEGAPPAFQQ FLVQHMASSL  300
TKDPNFASAL AAAISGRFSD QPRMGNW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.24e-73WRKY family protein