PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000893.1_g1170.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 190aa MW: 22158.4 Da PI: 10.6605

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000893.1_g1170.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.7	1.1e-32	20	73	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++F++a+e+LGG++kAtPk +l+lm+vkgLt++hvkSHLQ+YR+ Pav_sc0000893.1_g1170.1.mk 20 PRLRWTPELHHCFLHAIERLGGHKKATPKLVLQLMDVKGLTISHVKSHLQMYRS 73 8****************************************************7 PP
2	Myb_DNA-binding	51.4	2.4e-16	21	72	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++ +++a+++lGg+ t+k++ + m kg+t ++ks++q+y+ Pav_sc0000893.1_g1170.1.mk 21 RLRWTPELHHCFLHAIERLGGHkkaTPKLVLQLMDvKGLTISHVKSHLQMYR 72 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MTSCSARNGA VRQYVRSKVP RLRWTPELHH CFLHAIERLG GHKKATPKLV LQLMDVKGLT 60 ISHVKSHLQM YRSMRSDLGT RQQVTDRSYT QQRKQSFEEH DDGCLDEVNG VSFYPSSKSI 120 RESDSQLIYS TPRRSKRLLI KCQQKLEPRR RVQSQRACSS NAAKEYTRQS QIRTLSMIMC 180 WQWLNNSMEG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	3e-33	G2-like family protein