PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000893.1_g450.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 483aa MW: 51469.9 Da PI: 6.7244

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000893.1_g450.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	44.2	4.2e-14	71	101	25	55
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++A+Pk+ilelm+v+gL++e+v+SHLQk+Rl Pav_sc0000893.1_g450.1.mk 71 QEAVPKRILELMNVPGLSRENVASHLQKFRL 101 78****************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MAALQRVAQS SASTTASSYG SCKGGAASSF SAANEMAVSD RFPAGLRVLV VDDDTTCLRI 60 LEVLLGRCAY QEAVPKRILE LMNVPGLSRE NVASHLQKFR LYLKRLAQQQ SGISNGFCGP 120 VESNAKLGSL SRFDIQALAA SGQIPPQTLA VLQAELLGQP AGNLVPAMDQ PAILHASLQG 180 PKRAPVEHGV PFVQPLIKCQ SNVSKHFPQS IIPAEDVSSG FGSWRSNSLS TVAPSNNLGG 240 LATHNSSMLM DIMQQEQRQH KKTQQQSVLT ESSRLINVQP SCLVVPSQSS TSFQAGNSPA 300 SVNQSCSFNR STVIDYSILS AQSNNSSLNI GHIPTGNLKT PSILDGYSAH GSVPTTSCSV 360 NAGNNTSHQN SAVPFCDSRQ LPGVLHDMSN IQGLYVDKSG EMLDQGSLRN LGFVGKETGI 420 PSQFAVDDFE SQVSNLNHGK IYVENSGNPV KEEPSMNFVD NAKVGIPILQ EFSCSDFMSV 480 FTE

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MAALQRVAQS SASTTASSYG SCKGGAASSF SAANEMAVSD RFPAGLRVLV VDDDTTCLRI  60
LEVLLGRCAY QEAVPKRILE LMNVPGLSRE NVASHLQKFR LYLKRLAQQQ SGISNGFCGP  120
VESNAKLGSL SRFDIQALAA SGQIPPQTLA VLQAELLGQP AGNLVPAMDQ PAILHASLQG  180
PKRAPVEHGV PFVQPLIKCQ SNVSKHFPQS IIPAEDVSSG FGSWRSNSLS TVAPSNNLGG  240
LATHNSSMLM DIMQQEQRQH KKTQQQSVLT ESSRLINVQP SCLVVPSQSS TSFQAGNSPA  300
SVNQSCSFNR STVIDYSILS AQSNNSSLNI GHIPTGNLKT PSILDGYSAH GSVPTTSCSV  360
NAGNNTSHQN SAVPFCDSRQ LPGVLHDMSN IQGLYVDKSG EMLDQGSLRN LGFVGKETGI  420
PSQFAVDDFE SQVSNLNHGK IYVENSGNPV KEEPSMNFVD NAKVGIPILQ EFSCSDFMSV  480
FTE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	3e-26	ARR-B family protein