PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000910.1_g050.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 480aa MW: 51822.3 Da PI: 8.3808

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000910.1_g050.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.3	1e-30	221	279	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ Pav_sc0000910.1_g050.1.mk 221 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGNHNHP 279 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MVDDGISSDV DNKRAKNHEL AQLQVELQRM NSENLRLKEM LGQVTNNYSA LQMHVAAVMQ 60 QQQQQNQTAS ADQSSQLNHD QNVEAKSDQE KKQALMPRQF LNLGPRATAE TDDQVSNSSS 120 EARTRSASPQ NINEAASSKD HHLKKNDHPI GPLDPENSNN FRDGKRVGRE ESPESESQGW 180 VPNKAPKLNS AANKPTDQST EATMRKARVS VRARSEAPMI TDGCQWRKYG QKMAKGNPCP 240 RAYYRCTMAV GCPVRKQVQR CAEDRTILIT TYEGNHNHPL PPAAMAMAST TTAAASMLLS 300 GSMSSADGIM NPNNLLARAI LPCSSSVATI SASAPFPTVT LDLTTTPLQF QRPQSQFQVP 360 FPGQQPQLPQ VFGQALYNQS KFSGLQLSQD LMGSNSQQQQ QHLPHQTQSA SFADTVSAAT 420 AAITADPTFT AALAAAITSI IGGGHPNNNN NNNSASTTSN NSNGGNNNNG NSKMSGFPGH

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MVDDGISSDV DNKRAKNHEL AQLQVELQRM NSENLRLKEM LGQVTNNYSA LQMHVAAVMQ  60
QQQQQNQTAS ADQSSQLNHD QNVEAKSDQE KKQALMPRQF LNLGPRATAE TDDQVSNSSS  120
EARTRSASPQ NINEAASSKD HHLKKNDHPI GPLDPENSNN FRDGKRVGRE ESPESESQGW  180
VPNKAPKLNS AANKPTDQST EATMRKARVS VRARSEAPMI TDGCQWRKYG QKMAKGNPCP  240
RAYYRCTMAV GCPVRKQVQR CAEDRTILIT TYEGNHNHPL PPAAMAMAST TTAAASMLLS  300
GSMSSADGIM NPNNLLARAI LPCSSSVATI SASAPFPTVT LDLTTTPLQF QRPQSQFQVP  360
FPGQQPQLPQ VFGQALYNQS KFSGLQLSQD LMGSNSQQQQ QHLPHQTQSA SFADTVSAAT  420
AAITADPTFT AALAAAITSI IGGGHPNNNN NNNSASTTSN NSNGGNNNNG NSKMSGFPGH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-104	WRKY family protein