PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000975.1_g110.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 229aa    MW: 24362.1 Da    PI: 10.309
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000975.1_g110.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.2e-202575256
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                               +y+GVr ++ +gr++AeIrdp   gk++r++lg+f+taeeAa+a+++a+++++g+
  Pav_sc0000975.1_g110.1.mk 25 RYRGVRKRP-WGRYAAEIRDP---GKKTRVWLGTFDTAEEAARAYDKAAREFRGA 75
                               59*******.**********8...557*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MAPTTPKSPT KSGSETLSPN SKEIRYRGVR KRPWGRYAAE IRDPGKKTRV WLGTFDTAEE  60
AARAYDKAAR EFRGAKAKTN FPTPAELQLE AAANINSHNN NNVPKAAAAN NSPSQSSTVE  120
SSSPPPPPLD LALAPHFAAA GGYFTAASGF RAVPVARPVL FFDAFARAEN AAALQRAREM  180
CRFERAVAAP SSGGAHSDSS SSSVVNFDRS LPNGRLDLDL NLPPPSEVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.13e-29ERF family protein