PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000983.1_g150.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 207aa    MW: 23155.2 Da    PI: 8.9749
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000983.1_g150.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY51.91.5e-161591982159
                                -EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY  21 prsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                 r+YY+C+s  gCp++k+ver+ e+p+++++tYegeHnh+
  Pav_sc0000983.1_g150.1.mk 159 KRGYYKCSSMrGCPARKHVERCLEEPSMLIVTYEGEHNHP 198
                                69*****9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MEDVEEANKA AVESCHRVLS LFSQPQDQVQ YRNLMVETGK AVSKFKKVVS LLNTGLGHAR  60
VRKRKKLQIP FPERILLDNP NCITDYPSKT PHFIQSSFPE NPVQDLDGSV ANFDGNSFHL  120
IGAPHSSDQN SQHKRKCSAR GDDGSVKCGS SGRCHCSKKR GYYKCSSMRG CPARKHVERC  180
LEEPSMLIVT YEGEHNHPRI PSQSTTT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16266RKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.14e-43WRKY family protein