PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000983.1_g300.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 334aa MW: 35935.6 Da PI: 6.27

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000983.1_g300.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28	3.8e-09	183	227	5	54
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 h+++Er RR+ri +++ L+el+P+ + K + a++L + ++Y+k L Pav_sc0000983.1_g300.1.mk 183 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIMDYVKFL 227 99*********************55......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MANNPSEAPA DDFLEQILGL PNFASADANL AGNDGGLTGA QVSPSPMMLQ LNSGDGSGHI 60 AAVGVGGGYR GPVFPLGLSL EQGKAGFLKP EEASGSGKRF RDDMVDSRGS SVKNEDTSRL 120 LEKWELNGWP ESNKKLTNLS HEKQSEVRVF HGQPISNSVA AAPHPPAMRP RVRARRGQAT 180 DPHSIAERLR RERIAERIRA LQELVPSVNK TDRAAMLDEI MDYVKFLRLQ VKVLSMSRLG 240 GAGAVAPLVT DIPLSSVEEE GGEGGRNQPA WDKWSNDGTE RQVAKLMEEN VGAAMQFLQS 300 KALCIMPISL ASAIYHTQPP DTSSVVKPEM NPPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	188	193	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02590.2	1e-105	bHLH family protein