PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001046.1_g020.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 99aa    MW: 11053.6 Da    PI: 4.408
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001046.1_g020.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM49.81.2e-151466154
                        NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkae 54
                               +ppGfrF+Pt+eel+ +yL+k+v+ +k++  ++i ++d++k+ePwd++   k++
  Pav_sc0001046.1_g020.1.br 14 VPPGFRFQPTEEELLLYYLRKRVSCEKIDP-DIICDIDLNKFEPWDIQGPPKSQ 66
                               69***************************9.99**************7433333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
MTSISVSVNG ECKVPPGFRF QPTEEELLLY YLRKRVSCEK IDPDIICDID LNKFEPWDIQ  60
GPPKSQDQAL LTSWAAFDRL IASQLDGHTS SPIATLGSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.16e-18NAC family protein