PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001046.1_g620.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 103aa    MW: 12040 Da    PI: 9.8907
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001046.1_g620.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM35.72.6e-1118941385
                        NAM 13 elvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWka 85
                                l+ ++Lk+ ++gk  ++ ++i+e+d++k+eP+dL +        + + w+ Fs+ + k+ ++ r nra+k+g  +a
  Pav_sc0001046.1_g620.1.br 18 SLILRFLKQMMQGKASQACHIIPEIDVCKYEPSDLAEllfpDSPYQPRMWFSFSRPHYKSINSLRYNRAAKKGKSQA 94
                               4899***********999999**************85455533447789********************99996444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 103 aa     Download sequence    
MPEIDYKPWN LPDNESISLI LRFLKQMMQG KASQACHIIP EIDVCKYEPS DLAELLFPDS  60
PYQPRMWFSF SRPHYKSINS LRYNRAAKKG KSQASHKVVI LKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.19e-08NAC family protein