PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001080.1_g580.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 237aa    MW: 27281.8 Da    PI: 9.8234
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001080.1_g580.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM117.81e-36151441128
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk 84 
                                +p+G+rFhPtdeelv +yLk+kv++ +l++ ++i+++d+++++Pw Lp +    +++ yfF ++ ++ +  + ++ra+  gyWk
  Pav_sc0001080.1_g580.1.mk  15 MPVGYRFHPTDEELVIHYLKRKVHAAPLPA-SIIPDFDVFHTHPWGLPGCGGDVREKRYFFYNQINAIE-IDDTRRAAGCGYWK 96 
                                699***************************.89***************654444456699988888764.6789999******* PP

                        NAM  85 atgkdkevlsk.kgelvglkktLvfy...kgrapkgektdWvmheyrl 128
                                  gk+k++++  ++e+vg++ktLvf    +  +++ +kt+W+mhey+l
  Pav_sc0001080.1_g580.1.mk  97 PMGKEKQIVDPeSSEAVGIRKTLVFCqrkRRYHETQTKTRWFMHEYQL 144
                                *********9967888**********54323345667*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MEKLPNFVIN GGVKMPVGYR FHPTDEELVI HYLKRKVHAA PLPASIIPDF DVFHTHPWGL  60
PGCGGDVREK RYFFYNQINA IEIDDTRRAA GCGYWKPMGK EKQIVDPESS EAVGIRKTLV  120
FCQRKRRYHE TQTKTRWFMH EYQLLSSQVN PTHSQASKRE LGNWVVYRVF QRKRKPQRSS  180
DIIPQPSNSK RTRTQRLVEV ITPSSSSTCS SDITHLSSNA NRLDHDQEEN SSAAADN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14000.15e-42NAC family protein