PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001107.1_g090.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 207aa MW: 22660.8 Da PI: 6.6561

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001107.1_g090.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.4	1.4e-09	53	100	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + ++ Ka +L + ++Y++ Lq Pav_sc0001107.1_g090.1.mk 53 SHSLAERARREKISERMKLLQSLVPGC----DQITGKAHVLDEIIKYVHLLQ 100 8***********************9....9**************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MLSQEEGERK GKKQRKQNGS EAKKHRKVAA ASAEGVQRDG VRVKARRGEA TDSHSLAERA 60 RREKISERMK LLQSLVPGCD QITGKAHVLD EIIKYVHLLQ NQVECLAAKL AFVDAMLYDD 120 CELNPSTNPC ASDQRLCCLE PPLPFVLEPP PSSVQFRCLA DAAPPGTLDS LLLTEDQKAS 180 LIPQAQDGGS FEEIGKQPAG LDHSCTF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	1e-36	bHLH family protein