PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001183.1_g020.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 438aa MW: 49501.3 Da PI: 5.8295

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001183.1_g020.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	127.7	9.1e-40	16	144	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgy 82 lp+GfrF+Ptdeelv++yLk+kv+g ++++e +i+e+di+k+ePwdL k +k ++++ +fFs+ +y+ +k+++r+t+ g+ Pav_sc0001183.1_g020.1.br 16 LPVGFRFRPTDEELVDYYLKNKVQGMDFHAEGIIDEIDILKFEPWDLVaKsLMKPDDESGFFFSQP--EYTPKKKTKRTTEVGF 97 79**************************999**********7442444466666888876..4566889***** PP NAM 83 Wkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127 Wk tg+++++ ++ +++++g k++L+fy g+ +++ kt+Wvmhey Pav_sc0001183.1_g020.1.br 98 WKITGREHDIRTRdrRRTVIGKKRILTFYIGQVRNSDKTNWVMHEYY 144 *******99767778*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MISFSRAAAE GGDLTLPVGF RFRPTDEELV DYYLKNKVQG MDFHAEGIID EIDILKFEPW 60 DLVAKSLMKP DDESGFFFSQ PEYTPKKKTK RTTEVGFWKI TGREHDIRTR DRRRTVIGKK 120 RILTFYIGQV RNSDKTNWVM HEYYIPKAHP NANQRDFVLC HLKKNVKNSG EIHTDVATTC 180 DEVEPSTHNE SDFENPPAHD MIDILEEYVD YNALQTAFVA NDSDAEFAEF LETVLVEPDG 240 GVTSDTDMEP FHGHVQTEMD RGVFYGSSQP SRDTGGIFRN QISPQAASSV NVAPKPETDR 300 VQLKSDASQG AQGPRHLSGP IIDTSADEYY TKEKTRRRTY PPAKPKQPAY RGTAADLPQK 360 QISVTNSSQD KKVAQGKNAE KGMEQTQNRT TVSNWKGSFI TWQTSPLTTS PPSVYISNIF 420 LGLFLLYSCV REVVLYGE

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MISFSRAAAE GGDLTLPVGF RFRPTDEELV DYYLKNKVQG MDFHAEGIID EIDILKFEPW  60
DLVAKSLMKP DDESGFFFSQ PEYTPKKKTK RTTEVGFWKI TGREHDIRTR DRRRTVIGKK  120
RILTFYIGQV RNSDKTNWVM HEYYIPKAHP NANQRDFVLC HLKKNVKNSG EIHTDVATTC  180
DEVEPSTHNE SDFENPPAHD MIDILEEYVD YNALQTAFVA NDSDAEFAEF LETVLVEPDG  240
GVTSDTDMEP FHGHVQTEMD RGVFYGSSQP SRDTGGIFRN QISPQAASSV NVAPKPETDR  300
VQLKSDASQG AQGPRHLSGP IIDTSADEYY TKEKTRRRTY PPAKPKQPAY RGTAADLPQK  360
QISVTNSSQD KKVAQGKNAE KGMEQTQNRT TVSNWKGSFI TWQTSPLTTS PPSVYISNIF  420
LGLFLLYSCV REVVLYGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.1	6e-32	NAC family protein