PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001183.1_g180.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 197aa MW: 23433.7 Da PI: 7.7766

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001183.1_g180.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	142.9	1.9e-44	4	131	4	128
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyat.gkrknratksgyW 83 frF+Pt+eelv++yL+kk ++k+++++++i+e+di+k+ePwdLp + ++ ++++fFs+rd ky + + r+nrat++g+W Pav_sc0001183.1_g180.1.mk 4 SFRFRPTEEELVNHYLRKKKQDKDFKVDHIIPEIDICKYEPWDLPGlyaEPQSPYQDMFFFSPRDYKYINkSARTNRATERGFW 87 69***********************999***********5233333344588******97467******* PP NAM 84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 k+tgk++ ++ +e +g kktL+fy+gr pk +kt+Wvmhey l Pav_sc0001183.1_g180.1.mk 88 KNTGKERVIKG-ARESIGRKKTLTFYEGRVPKCNKTNWVMHEYYL 131 **99999.8899*************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MDISFRFRPT EEELVNHYLR KKKQDKDFKV DHIIPEIDIC KYEPWDLPGL YAEPQSPYQD 60 MFFFSPRDYK YINKSARTNR ATERGFWKNT GKERVIKGAR ESIGRKKTLT FYEGRVPKCN 120 KTNWVMHEYY LCEDEAIPNP KLAQQRDFVL CRLKKKTDKK DASTCAEAEP AYYEWLGISE 180 ECPQPEELEL VFPALQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.1	6e-49	NAC family protein