PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001183.1_g200.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 164aa    MW: 19266.1 Da    PI: 7.5908
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001183.1_g200.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM98.11.3e-3051245128
                        NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.......kvkaeekewyfFskrdkkya..tgkrknratk 79 
                                frF Pt+eelv +yL+kk + +     ++i+e+di ++ePwd p        + ++  ++++fFs+r  ky   +  r+n at+
  Pav_sc0001183.1_g200.1.br   5 FRFLPTEEELV-HYLRKKKQVD-----HIIPEIDISNYEPWDVPGlyaglftEPDSPYQDMFFFSPRVYKYIdnNYARTNSATA 82 
                                9**********.9**9985544.....47***************54666544333344588*********98434569999*** PP

                        NAM  80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                +g+Wk+tgk++ +++  +  +g k+tL+fy     +g+kt+Wvmhey+l
  Pav_sc0001183.1_g200.1.br  83 RGFWKTTGKERVIKA--RGSIGRKRTLIFY-----EGNKTNWVMHEYSL 124
                                **********99998..557**********.....7889********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MDSNFRFLPT EEELVHYLRK KKQVDHIIPE IDISNYEPWD VPGLYAGLFT EPDSPYQDMF  60
FFSPRVYKYI DNNYARTNSA TARGFWKTTG KERVIKARGS IGRKRTLIFY EGNKTNWVMH  120
EYSLIEDEAN PPTPKLAHQV ILLHPCLLYI LCCVWLVQHQ VPLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.14e-29NAC family protein