PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001183.1_g230.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 218aa MW: 25874.6 Da PI: 7.1963

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001183.1_g230.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	127.8	8.7e-40	5	133	5	126
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgy 82 frF Pt+eelv++yL+kk ++k+++++++i+e+di+k+ePwd p + ++ ew+fFs+rd k ++ nr+t +g+ Pav_sc0001183.1_g230.1.br 5 FRFLPTEEELVNHYLRKKKQDKDFKVDHIIPEIDICKHEPWDVPGllftepESPYQDMEWFFFSPRDYKCINSAGINRVTPRGF 88 9***********************999***********54666553344888********************** PP NAM 83 Wkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmhey 126 Wk tgk++ + ++ +++++g+k++L+fy+gr ++++kt+Wvm ey Pav_sc0001183.1_g230.1.br 89 WKITGKKRLIRARgSEAVIGMKRSLIFYEGRVRQSKKTNWVMYEY 133 *******99666679***********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MDRHFRFLPT EEELVNHYLR KKKQDKDFKV DHIIPEIDIC KHEPWDVPGL LFTEPESPYQ 60 DMEWFFFSPR DYKCINSAGI NRVTPRGFWK ITGKKRLIRA RGSEAVIGMK RSLIFYEGRV 120 RQSKKTNWVM YEYYEANPNP KLAQQRDFVL CRLKKIADPL KKKADKQHTS TYAKAEPAYT 180 EWHGIPEDHP QPEDLELIFP ALQLQDDMLE MDTEVADV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.2	2e-41	NAC family protein