PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001183.1_g240.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 172aa    MW: 20363.1 Da    PI: 6.9351
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001183.1_g240.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM111.59.5e-3551285128
                        NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyatgkrknratksg 81 
                                frF Pt+eelv++yL++k + +     ++i+e+di+k+ePwd p        + ++  ++++fFs+r  +y+++ r +r+t+ g
  Pav_sc0001183.1_g240.1.br   5 FRFLPTEEELVSHYLREKKQVD-----HIIPEIDICKHEPWDVPGlyaglftEPESPYQDMFFFSPRVYEYNNSARIERTTALG 83 
                                9**************9985544.....47***************54666544333344588*********************** PP

                        NAM  82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                +Wk tgk++ +++  +  +g kktL+fy+gr ++++kt+Wvm ey l
  Pav_sc0001183.1_g240.1.br  84 FWKITGKERVIKA--RGSTGRKKTLTFYEGRVRQSKKTNWVMYEYYL 128
                                ********99998..5569**************************76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MDSYFRFLPT EEELVSHYLR EKKQVDHIIP EIDICKHEPW DVPGLYAGLF TEPESPYQDM  60
FFFSPRVYEY NNSARIERTT ALGFWKITGK ERVIKARGST GRKKTLTFYE GRVRQSKKTN  120
WVMYEYYLVE DEANPNPTLA QQRDFVLCRL KKKADDKKHT SIYAEAEPAC DE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.13e-38NAC family protein