PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001196.1_g1380.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 261aa    MW: 29473.5 Da    PI: 8.7998
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001196.1_g1380.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM80.92.6e-2591411128
                         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk....kvkaeekewyfFskrdkkyatgkrknrat 78 
                                 +p Gf+F+P+d+el+ +yL +kv+g++++ ++v++e+++y k ePwd+ +    +  ++ +++yfF+k +  + +g+r  r++
  Pav_sc0001196.1_g1380.1.br   9 VPIGFKFRPSDDELLRYYLLNKVSGTPFKYSNVVSEFNLYgKKEPWDIWNdfggQNLEKGEDLYFFTKLKLVTGKGSRVARTI 91 
                                 589***************************9*******99456*****753444333356789******************** PP

                         NAM  79 ksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                  +g+Wk   + ++v +   k++  gl k + + +  +++ ++  W+mhey+l
  Pav_sc0001196.1_g1380.1.br  92 GNGTWKGEDRGTTVRDPakKNTPLGLCKRFRYEN--DKSDQHGCWIMHEYSL 141
                                 ******999999998876566679*****99984..4444699*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MAPCEYVDVP IGFKFRPSDD ELLRYYLLNK VSGTPFKYSN VVSEFNLYGK KEPWDIWNDF  60
GGQNLEKGED LYFFTKLKLV TGKGSRVART IGNGTWKGED RGTTVRDPAK KNTPLGLCKR  120
FRYENDKSDQ HGCWIMHEYS LHPSLVKPLS NSNTCGGDGK YVLCRFRKND RKRKLSENDG  180
VGGHALVLQS PTKILRQLES SDEVVLGANC TPISEASEVT NHYNQYVLRF SCSDHIPITL  240
EEITKVQQPL AIGKGISTVK I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03200.12e-19NAC family protein