PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001196.1_g460.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 118aa    MW: 13567.4 Da    PI: 5.7622
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001196.1_g460.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.41.6e-1016961389
                               TT-EE--HHH.HTT...---..--SEEEEEETTS..-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                         B3 13 sgrlvlpkkfaeeh...ggkkeesktltledesg..rsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrse 89
                               +grl +p + + ++      +++s+++++e ++g    W++ +++rkk+ r  ++ ++GW +Fv+a+gL++gD vv+  + ++ 
  Pav_sc0001196.1_g460.1.br 16 EGRLAVPSEWL-KIlppF--ENGSFEVQFEVTDGvgFYWQLCCSIRKKGYRkpVLQSEGWLKFVNAKGLQVGDKVVIDTEANDF 96
                               46789999999.555542..45777888887777447777777776666556566679******************99665433 PP
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    
MAHFEFEKYL TETDIEGRLA VPSEWLKILP PFENGSFEVQ FEVTDGVGFY WQLCCSIRKK  60
GYRKPVLQSE GWLKFVNAKG LQVGDKVVID TEANDFRGTN IRIRAQKDLN GNGHWVDV