PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001196.1_g470.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 117aa    MW: 13641.7 Da    PI: 8.9799
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001196.1_g470.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.73.2e-11596190
                               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS..-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEE CS
                         B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesg..rsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvF 82
                               f+k lt sd+ ++  +++p + ++    ++++s ++ ++ ++g    We+ ++ r+++ r  ++ ++GW +Fv+ +gLk+gD +v+
  Pav_sc0001196.1_g470.1.br  5 FEKCLTESDTVSR--FSVPISWLKVLPPIEQGSHEVNFQVTDGlgFFWEFCCSTRRGRYRkpVLQSEGWLKFVNYKGLKVGDKIVL 88
                               8999999999987..6*******77744455555555555555449******875555556566679******************9 PP

                               EE-SSSEE CS
                         B3 83 kldgrsef 90
                                 + ++ +
  Pav_sc0001196.1_g470.1.br 89 DTEANDFR 96
                               97654333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    
MAAPFEKCLT ESDTVSRFSV PISWLKVLPP IEQGSHEVNF QVTDGLGFFW EFCCSTRRGR  60
YRKPVLQSEG WLKFVNYKGL KVGDKIVLDT EANDFRGTKF RIRAQKFNKE CDRWLDV