PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001215.1_g270.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 222aa MW: 25503.3 Da PI: 6.4222

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001215.1_g270.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.3	5.4e-31	22	74	2	54
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 prlrWtp+LHe Fveave+LGG++kAtPk+il++m+vkgL ++hvkSHLQ+YR Pav_sc0001215.1_g270.1.mk 22 PRLRWTPQLHELFVEAVESLGGKHKATPKRILQTMSVKGLKISHVKSHLQMYR 74 8**************************************************** PP
2	Myb_DNA-binding	54.2	3.4e-17	23	74	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++el+v+av+ lGg+ t+k+I +tm kg+ ++ks++q+y+ Pav_sc0001215.1_g270.1.mk 23 RLRWTPQLHELFVEAVESLGGKhkaTPKRILQTMSvKGLKISHVKSHLQMYR 74 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MNEEMKSYQK IGVRQYQKSD LPRLRWTPQL HELFVEAVES LGGKHKATPK RILQTMSVKG 60 LKISHVKSHL QMYRGVNDNA HSQDHSSNVF SIFSPQTQTQ RPSENYLRYE AHAMFSETDE 120 ETKRRILTQE EAAGKQQNQN AHTPELSRLS MDEETCQLYG FCELSLSFNP TVTTMARFRK 180 ESELWPSADE HNTSQSSSTG NFSNIQDFQE VGSNDINLDL TI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	1e-28	G2-like family protein