PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001305.1_g030.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 278aa MW: 30816.1 Da PI: 8.7035

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001305.1_g030.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	113.5	9.4e-36	42	100	2	60
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 + + lkcprC+stntkfCyynny+ +qPr+fC+aC+r+WtkGG+lrnvPvGggr++++ Pav_sc0001305.1_g030.1.mk 42 QPEPLKCPRCESTNTKFCYYNNYNKQQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRL 100 56889***********************************************9776654 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MGLSTKQVSS DGLDWSQASL LQAQTFQLPK SPSAMRRQQQ QQPEPLKCPR CESTNTKFCY 60 YNNYNKQQPR HFCRACKRHW TKGGTLRNVP VGGGRKNKRL KKSSNSTSAS AAATTTTTNS 120 AAIDQTDHQE QKLMSQVFYQ ALPQQNLDNT IIFSSSSSPG LSASTLPFLH QSRNLSFPFS 180 SSISTTSSSF DTNLSSISTS LQSSNVYNYA TAAAEDQFKA IEEPTITSIM PNISQPNWKV 240 PTSSNAMDVY SNDWNWEDIE TLVSTDLNLP WDGSDIKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07640.1	9e-28	Dof family protein