PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001305.1_g1010.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 264aa    MW: 28549.7 Da    PI: 9.9763
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001305.1_g1010.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2651.5e-202373256
                         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                                +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa+++++g+
  Pav_sc0001305.1_g1010.1.mk 23 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRGA 73
                                69*******.**********8...557*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MAPREKTATA VRANGNGNVK EVHFRGVRKR PWGRYAAEIR DPGKKSRVWL GTFDTAEEAA  60
RAYDAAAREF RGAKAKTNFP LPSENISLNI TKNNNININN NINKNGSGSN NQSPSQSSTV  120
ESSSREPPAL MVDSSPLDLN LAHGVSSGGF GSGPMRFPFQ QQQVPSVGAV IGVPASAAAA  180
ANHVLYFDSV FRAGMVKSHQ FHQRLRFDHH NLQQHDFHTY GGSRVFACGA QSDSDSSSVV  240
DLNNHDPPRV GLLDLNLPPP PELA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-27ERF family protein