PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001305.1_g910.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

SBP

Protein Properties

Length: 162aa MW: 18563.1 Da PI: 5.9716

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001305.1_g910.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	134.6	3.2e-42	81	157	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cq+++C+adls+ak+y+rrhkvC vh+kap+v v g++qrfCqqCsrfh+lsefD++krsCrrrLa+hnerrrk+++ Pav_sc0001305.1_g910.1.mk 81 CQADDCNADLSDAKQYYRRHKVCGVHAKAPAVRVGGVQQRFCQQCSRFHSLSEFDDNKRSCRRRLAGHNERRRKTSS 157 **************************************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
MESNRAHGKR SLNYKMEEEE EEEEDEEEEQ EEEDDDADTN KSSLVYGEDE RRKRVLMVNS 60 ATTTPSKRGS GAGGSMPRPS CQADDCNADL SDAKQYYRRH KVCGVHAKAP AVRVGGVQQR 120 FCQQCSRFHS LSEFDDNKRS CRRRLAGHNE RRRKTSSDYH GE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33810.1	2e-41	SBP family protein