PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001305.1_g990.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 172aa    MW: 18257.6 Da    PI: 9.8304
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001305.1_g990.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.13e-201160255
                        AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               +y+GVr ++ +gr++AeIrd ++    ++r++lg+f+t+eeAa a++ a+++l+g
  Pav_sc0001305.1_g990.1.mk 11 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTPEEAALAYDGAARSLRG 60
                               69*******.**********883....5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MATASSSREG HYRGVRKRPW GRYAAEIRDP WKKTRVWLGT FDTPEEAALA YDGAARSLRG  60
SKAKTNFPAP VPGGLSLDLN IPSATHWASH SGRLVEFLHT GVLNDMSCGV ATPDTTSLVS  120
KKEQPQPPVG VVGNVGGVAG GTVAEGSSTA SYLGLVRRGL PIDLNEPPPL WL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.12e-48ERF family protein