PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001309.1_g810.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 138aa    MW: 15790.4 Da    PI: 4.3898
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001309.1_g810.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding249.1e-08935127
                               TSSS-HHHHHHHHHHHHHTTTT-HHHH CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktI 27
                               +g WT eEd +l d+++ +G+g W+++
  Pav_sc0001309.1_g810.1.mk  9 KGLWTVEEDRILMDYIRVHGKGKWNRV 35
                               678**********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
MAGGNEYKKG LWTVEEDRIL MDYIRVHGKG KWNRVNKVTE SNSEQQPQPN SNSNIGDHEA  60
ASAAGFDDKL MMIKDNIGSK SGVGFCGMWE AMMNNNNYDS SFWFYNDDLN LYSPYYLLDP  120
SLDDHHYPLQ FEFVSDGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14750.12e-15MYB family protein