PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001323.1_g1040.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 70aa    MW: 8055.19 Da    PI: 5.4723
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001323.1_g1040.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM51.33.9e-16855149
                         NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49
                                lppGfrF+Ptdeelvv++L++k++  +++  +vi+++++y+++Pw+L++
  Pav_sc0001323.1_g1040.1.mk  8 LPPGFRFDPTDEELVVHFLQRKAALLPFHP-DVIPDLHLYQYDPWELDA 55
                                79*************************999.99**************73 PP
Sequence ? help Back to Top
Protein Sequence    Length: 70 aa     Download sequence    
MGDDQFKLPP GFRFDPTDEE LVVHFLQRKA ALLPFHPDVI PDLHLYQYDP WELDAGGRRI  60
GLQAMGIGRH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.11e-23NAC family protein