PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001335.1_g540.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 106aa    MW: 12852.5 Da    PI: 8.4911
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001335.1_g540.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.19.6e-093271445
                               S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
            Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                               +T++E++ll++  ++ G++ W++Ia +++ gR ++++  +w 
  Pav_sc0001335.1_g540.1.mk 32 MTEQEEDLLYRMYRLVGPR-WDLIAGRIP-GRKPEELERFWI 71
                               7****************99.*********.********9995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MQTMDRCRRK RPKTATSESD EVISNEWEFI NMTEQEEDLL YRMYRLVGPR WDLIAGRIPG  60
RKPEELERFW IMRHCDTFAD KRNQQTKDNS KKCWSSNVNS ESKFFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53200.13e-39MYB_related family protein