PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001335.1_g640.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 364aa    MW: 40780.5 Da    PI: 4.4062
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001335.1_g640.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.76.7e-19117166255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                +++GVr+++ +g+W+AeIrdp     r  r +lg+f taeeAa  +++a+ kl+g
  Pav_sc0001335.1_g640.1.mk 117 KFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTFETAEEAAMVYDNAAIKLRG 166
                                89*******.**********82....35*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MDSSILCPIK YTEHRNTIKK LTKPRKKPTT ESTSSSIPRI VRISMTDPDA TDSSSGEEDE  60
FFGRQRVKHY INEINIQTDF RNTLVLPNNG RKRSTVQPPA SRPMVKNSIS QTNGSRKFRG  120
VRQRPWGKWA AEIRDPARRV RLWLGTFETA EEAAMVYDNA AIKLRGPDAL TNFVSPLPKE  180
EEKPELPVEP LIEEAEPVIE SLEVEITNGT TSGSGYDSGS ESHNNLSSPT SVLHFRTQPK  240
MEEAHEPQKL QVFDQVMQEC EDETGTNFVS DDLGNYLPLD LPYLDDVFSF PAPDSPLFFD  300
TPMFFDDATA AAATLPECLL KEDFSDMFGD TYDTSLSPTT SSMCQGGEDY FQDILFGSDP  360
LVVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-51ERF family protein