PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001339.1_g090.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 422aa MW: 45963.9 Da PI: 8.8616

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001339.1_g090.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.6	5.1e-33	195	251	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers d+++ ei+Y+geHnh+k Pav_sc0001339.1_g090.1.mk 195 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSL-DGQIAEIVYKGEHNHSK 251 9*************************************.*************85 PP
2	WRKY	56.2	6.8e-18	360	398	21	59
-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 21 prsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 rsYYrCts +C+v+k+ver ++dpk++++tYeg+Hnh+ Pav_sc0001339.1_g090.1.mk 360 RRSYYRCTSLKCSVRKHVERVSDDPKAFITTYEGKHNHD 398 69************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MDIKEAERVV IAKPVASRPT CSSFRSFTEL LAGAIDASPS NISSETAVPA IRPKTVRFKP 60 TVNHAVSGLV SSQAEMSGTA HSNSSEKISK SDSRASVVYK PLAKVVSRAT VSVLANMGNF 120 NTSHQSTQSS VEAGVLHQNQ DKCFRSQLSP NLRHNNPSCA ETNQTIEPLK IASQNMEEDP 180 KPIPSTANTD RPSYDGYNWR KYGQKQVKGS EYPRSYYKCT HPNCPVKKKV ERSLDGQIAE 240 IVYKGEHNHS KPQPPKKSSS GTQGLGLASN GTGQDTNNRL WNSQLNERNE GSEGRVEDQN 300 EAGLPVHSYQ SKAPLLYDPL ASGGINAGGG TPDNSCGLSG ECEEGSKGPE AEDYEPRSKR 360 RSYYRCTSLK CSVRKHVERV SDDPKAFITT YEGKHNHDMP LRNTNPGASE KDAQAPTSKE 420 KP

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MDIKEAERVV IAKPVASRPT CSSFRSFTEL LAGAIDASPS NISSETAVPA IRPKTVRFKP  60
TVNHAVSGLV SSQAEMSGTA HSNSSEKISK SDSRASVVYK PLAKVVSRAT VSVLANMGNF  120
NTSHQSTQSS VEAGVLHQNQ DKCFRSQLSP NLRHNNPSCA ETNQTIEPLK IASQNMEEDP  180
KPIPSTANTD RPSYDGYNWR KYGQKQVKGS EYPRSYYKCT HPNCPVKKKV ERSLDGQIAE  240
IVYKGEHNHS KPQPPKKSSS GTQGLGLASN GTGQDTNNRL WNSQLNERNE GSEGRVEDQN  300
EAGLPVHSYQ SKAPLLYDPL ASGGINAGGG TPDNSCGLSG ECEEGSKGPE AEDYEPRSKR  360
RSYYRCTSLK CSVRKHVERV SDDPKAFITT YEGKHNHDMP LRNTNPGASE KDAQAPTSKE  420
KP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37260.1	8e-85	WRKY family protein