PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001411.1_g180.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family SBP
Protein Properties Length: 97aa    MW: 11071.5 Da    PI: 7.6049
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001411.1_g180.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP27.11.1e-086789123
                               --SSTT-----TT--HHHHHTT- CS
                        SBP  1 lCqvegCeadlseakeyhrrhkv 23
                               +Cq+++C adls+ak+yhrrhk+
  Pav_sc0001411.1_g180.1.mk 67 CCQADRCPADLSDAKQYHRRHKL 89
                               6********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    
MEVMSKINLN KQMRMEKPHV VVKEEEEEDE EFDHHQQLED HDKKKKGIVG GSGSVKRSGT  60
SGGGMRCCQA DRCPADLSDA KQYHRRHKLK IPTVQVD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60030.11e-06SBP family protein