PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001454.1_g330.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 212aa    MW: 24938.9 Da    PI: 10.709
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001454.1_g330.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.62.5e-07179212243
                                SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHH CS
            Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksr 43 
                                g+WT+eE       v+++G ++W  Ia+ ++ gR +kqc++r
  Pav_sc0001454.1_g330.1.br 179 GPWTKEE-------VERHGAKRWYVIAKFLP-GRMGKQCRER 212
                                5666666.......899**************.********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MKTLFLLETL LSSFLSLLES LLSSLKQSLS HFFATHTYLP ATPWMQRHHR CQRRLEAIDA  60
IDAVMPSKPP KPQRHRHHDA TDAILSHPRH RRHRLLRISH HQPPATPTTY LVSFFSCALL  120
LCSEEFFSLR DMSAQMHQIY RNLLQILSGR ATSPMRRSAK CWTEEERWQN VLNPEIVKGP  180
WTKEEVERHG AKRWYVIAKF LPGRMGKQCR ER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11510.15e-19MYB family protein