PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001488.1_g330.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ERF

Protein Properties

Length: 463aa MW: 51861.1 Da PI: 6.0131

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001488.1_g330.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	60.2	4.8e-19	217	267	2	56
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++ + kl+ge Pav_sc0001488.1_g330.1.mk 217 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 267 59****9.******955...5************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MAAAKKSGKS KKGVEESEME TSLDWGINED KDLGFSFESQ PWKLGFNEAS MMSKRPLKKI 60 KSPERQDPIQ SSASSAHQAP SSSTPCPSSS SSRIAFPFAF DGSQQPGQFP NQFNTTTVPI 120 YPSPFSQQQQ QQQNQQQMIS FASQQQQQQQ QQQQHGMSYP PSFLGDSTTW QQQQLLQYWS 180 DAFNLSPRGR VMMMNRLGPD GRPLFRPPAM PYNTTKLYRG VRQRHWGKWV AEIRLPRNRT 240 RLWLGTFDTA EDAAMAYDRE AFKLRGENAR LNFPELFLNK DNTSVSTARS STATSPTAHE 300 SSMPTTTRNR RQSRKVQKSL NLQASNTEAM PPPPPPPPHT EEDNTDDDSG LGSSEAKTSD 360 EFPANMNAAG GGNSQPEEMV WGDMAEAWLN AIPAGWGPGS PVWDDLDTNN NLLLQSHLPF 420 TNPNQQDFNN ICPELERQQD NSGSASSSSS SYPMKNFFWK DQD

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MAAAKKSGKS KKGVEESEME TSLDWGINED KDLGFSFESQ PWKLGFNEAS MMSKRPLKKI  60
KSPERQDPIQ SSASSAHQAP SSSTPCPSSS SSRIAFPFAF DGSQQPGQFP NQFNTTTVPI  120
YPSPFSQQQQ QQQNQQQMIS FASQQQQQQQ QQQQHGMSYP PSFLGDSTTW QQQQLLQYWS  180
DAFNLSPRGR VMMMNRLGPD GRPLFRPPAM PYNTTKLYRG VRQRHWGKWV AEIRLPRNRT  240
RLWLGTFDTA EDAAMAYDRE AFKLRGENAR LNFPELFLNK DNTSVSTARS STATSPTAHE  300
SSMPTTTRNR RQSRKVQKSL NLQASNTEAM PPPPPPPPHT EEDNTDDDSG LGSSEAKTSD  360
EFPANMNAAG GGNSQPEEMV WGDMAEAWLN AIPAGWGPGS PVWDDLDTNN NLLLQSHLPF  420
TNPNQQDFNN ICPELERQQD NSGSASSSSS SYPMKNFFWK DQD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20880.1	1e-54	ERF family protein