PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001519.1_g010.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 315aa    MW: 34618.9 Da    PI: 9.2342
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001519.1_g010.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.23.1e-1658107355
                        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                y+GV+++++ grW A+I  +     +k  +lg+fgt eeAa+a++ a+ k++g
  Pav_sc0001519.1_g010.1.mk  58 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFGTQEEAAEAYDIAAIKFRG 107
                                9***************988532...5************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MRPIFGTTVA RRKGKPEKEG KLENYTAQLE EMKNMSRQEY VAHLRRKSSG FSRGASMYRG  60
VTRHHQHGRW QARIGRVAGN KDLYLGTFGT QEEAAEAYDI AAIKFRGVNA VTNFDITRYD  120
VEKIMASNTL LAGEFARRTK EIEPNIEANA IEYNPSAQNN GEANQPEINN GNGLDWKMAL  180
YQSAQEQPTS CVQAVDQKSI GSLNYRHPSF SMALQDLIGV ESVNSNQPLM DESAKVGAHF  240
SNPSSLVTSL SSSREASPDK SGPNMLFAKP PLASKFICPT SAAAAAVSSW FPTAQLRPAA  300
ISMSHLPLFA AWNDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.11e-65AP2 family protein