PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001545.1_g110.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GeBP

Protein Properties

Length: 400aa MW: 43601.8 Da PI: 6.1572

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001545.1_g110.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	118.2	4.6e-37	175	269	1	98
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskeh 84 klfqr+ws++Dei++L+G+id+ +k+g++p++d+ af++f+kks++++v+k+ql +KirrLKkK++++v+k gk+ + k+h Pav_sc0001545.1_g110.1.mk 175 KLFQRIWSDDDEIAILKGMIDYSTKKGADPYSDMGAFHDFIKKSLKADVNKTQLQDKIRRLKKKYEMNVAK---GKKYNPVKPH 255 579******************************************************************...999999 PP DUF573 85 dqkifelskkiWgs 98 +qk+f+ls+k+Wgs Pav_sc0001545.1_g110.1.mk 256 EQKVFDLSNKVWGS 269 **********95 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MAPKRPSPLD EPPAASSSEE EVASSEEEVD GEEEEESGSG SESESEEPEP PKAAPTPVAE 60 KKPPPKKPDS ATVNSKPQSS SSGSESESES DSELDKDMVV KPIASKPMEE TPKTKKPRSK 120 ASATTTPAAR AGSKRPSESD PKDSKRPKKK IPDPDQEPDH AGEETKKAGG DDSKKLFQRI 180 WSDDDEIAIL KGMIDYSTKK GADPYSDMGA FHDFIKKSLK ADVNKTQLQD KIRRLKKKYE 240 MNVAKGKKYN PVKPHEQKVF DLSNKVWGSG EGSIGVGGLS EQSKSNGKAR TNQKGNNKTL 300 ASLKAEILSS PEPPKECEKV EIGSESLSEV IGYDKGFREL GLPEGVVKQG LELIGGAKRA 360 ELKEKWKKLH VAELDLFVKR SELMRDQAKV ILEALKSSEH

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MAPKRPSPLD EPPAASSSEE EVASSEEEVD GEEEEESGSG SESESEEPEP PKAAPTPVAE  60
KKPPPKKPDS ATVNSKPQSS SSGSESESES DSELDKDMVV KPIASKPMEE TPKTKKPRSK  120
ASATTTPAAR AGSKRPSESD PKDSKRPKKK IPDPDQEPDH AGEETKKAGG DDSKKLFQRI  180
WSDDDEIAIL KGMIDYSTKK GADPYSDMGA FHDFIKKSLK ADVNKTQLQD KIRRLKKKYE  240
MNVAKGKKYN PVKPHEQKVF DLSNKVWGSG EGSIGVGGLS EQSKSNGKAR TNQKGNNKTL  300
ASLKAEILSS PEPPKECEKV EIGSESLSEV IGYDKGFREL GLPEGVVKQG LELIGGAKRA  360
ELKEKWKKLH VAELDLFVKR SELMRDQAKV ILEALKSSEH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25210.1	3e-29	GeBP family protein