PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001557.1_g170.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 227aa    MW: 25151.8 Da    PI: 5.5989
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001557.1_g170.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24.1e-18115165255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ t+e+A  a+++a+ k++g
  Pav_sc0001557.1_g170.1.mk 115 HYRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTYETPEDAGLAYDRAAFKIRG 165
                                7********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MYGETTLELE SNLALLESIR HHLLDDLEPQ ATSFSGNNVS VTFPLFVTEN WCESSLEAEH  60
VDNTTQAEGV DNTIQDMLEA LHDVNYVGCV VSDDEVQLKE QVAESAVHAP RGERHYRGVR  120
RRPWGKFAAE IRDPAKNGAR VWLGTYETPE DAGLAYDRAA FKIRGCKAKL NFPHLIGSSN  180
VEPVRVTPKR RRSPDQCSSL SSSAYTSDNG SSKPKRREAG VDNHVAA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189215KRRRSPDQCSSLSSSAYTSDNGSSKPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.17e-41ERF family protein