PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001576.1_g360.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 63aa    MW: 7421.6 Da    PI: 11.1292
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001576.1_g360.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.32.3e-151055146
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                               +g+WTteEde l+  vk+ G+++W++I ++  + Rt+k+c++rw +
  Pav_sc0001576.1_g360.1.mk 10 KGPWTTEEDEVLISHVKKCGPRDWSSIRSRGLLPRTGKSCRLRWVN 55
                               79*************************8775577**********87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 63 aa     Download sequence    
MERPNAYAKK GPWTTEEDEV LISHVKKCGP RDWSSIRSRG LLPRTGKSCR LRWVNKLRPN  60
WKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.16e-29MYB family protein