PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001582.1_g330.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 395aa MW: 43779.9 Da PI: 6.9495

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001582.1_g330.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	91.6	5.9e-29	208	268	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqKe+ gs+fpr+YYrCt++ +Cp+kk+v+r ++dp ++e++Y+geH+++ Pav_sc0001582.1_g330.1.mk 208 EDGFTWRKYGQKEIMGSRFPRGYYRCTHQklyNCPAKKQVQRLDNDPLTFEVMYRGEHTCH 268 7**************************999*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MVHQHRSLTK AYIQLPFKFP YHHNMFKSKT SQKEPKQQLE DMDETTISLI LQACKLARDL 60 ESNLPNLANQ PNLLSNSLDE ITKNFVTARE RVYGQDPSTS SCLHNMLTFA HQQQIGTSHV 120 QEWLRSNYAQ QAMDIIQTQL VVDQKEAKIG GCIDDDDAEV KGLQAMEASD MNVASSSSQR 180 PRRRKDQGLI SKITVPAPRI GNTEIPPEDG FTWRKYGQKE IMGSRFPRGY YRCTHQKLYN 240 CPAKKQVQRL DNDPLTFEVM YRGEHTCHMS ATAPSIPPPS AEHHNATQES MARTLATTTT 300 TDPPTASLWL SMDFNPIRGG GGSSSGMIGS SRGGGGGGSG DGVGTSTTTR YGKEVDFPVV 360 DLADAMFNSG SSSTNSMDFI FTSAENKWES EDKKN

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MVHQHRSLTK AYIQLPFKFP YHHNMFKSKT SQKEPKQQLE DMDETTISLI LQACKLARDL  60
ESNLPNLANQ PNLLSNSLDE ITKNFVTARE RVYGQDPSTS SCLHNMLTFA HQQQIGTSHV  120
QEWLRSNYAQ QAMDIIQTQL VVDQKEAKIG GCIDDDDAEV KGLQAMEASD MNVASSSSQR  180
PRRRKDQGLI SKITVPAPRI GNTEIPPEDG FTWRKYGQKE IMGSRFPRGY YRCTHQKLYN  240
CPAKKQVQRL DNDPLTFEVM YRGEHTCHMS ATAPSIPPPS AEHHNATQES MARTLATTTT  300
TDPPTASLWL SMDFNPIRGG GGSSSGMIGS SRGGGGGGSG DGVGTSTTTR YGKEVDFPVV  360
DLADAMFNSG SSSTNSMDFI FTSAENKWES EDKKN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	181	185	PRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40740.1	2e-49	WRKY family protein