PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001623.1_g310.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CPP

Protein Properties

Length: 1051aa MW: 115102 Da PI: 6.3254

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001623.1_g310.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	51.2	2.5e-16	619	656	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkk+kClk+YC+Cfaag++C+e+C C++C+N + Pav_sc0001623.1_g310.1.mk 619 TKRCNCKKTKCLKLYCDCFAAGVYCAESCACQGCFNIT 656 699*********************************76 PP
2	TCR	50.1	5.5e-16	696	734	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks ClkkYCeC++a++ Cs+ C+C++CkN Pav_sc0001623.1_g310.1.mk 696 RHKRGCNCKKSMCLKKYCECYQANVGCSSGCRCDGCKNV 734 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 1051 aa Download sequence
MDSPEIRKIK ANTTSSSDSP PVQDSPVFSY INNLSPIQPV KASHLAQGFP VLNSPPLVFT 60 SPRINSHRDT SFLKRPQYQP LSSAEKPKTQ DEAKKFLDDP VDPKITQLHM RLITDSQDRE 120 TKIRVESQQC SSSEGVDEYL ADPSEVDCVD STQSASPCLK QSNNVPETFT GSKETTLYDN 180 KHNTGTDLGT EAKAPSEQAK EDLEGKQTFD AKPVKIIEQS DGDLPYDECP NEYLADPSEV 240 DCVDSTQSAS PCLKQSNNVP ETFTGSKETT LYDKKHNTGT DLGTEAKAPS EQAKEDLEGK 300 QTFDAKPVKI IEQSDGDLPY DECPNIESGL SIDNAYKREY RQHLHDQDRG GKHQDDCDHT 360 PQSPPGRLQI VQVYENSAEN VGAISKGMIG NMILHAPKAR SEQGGMHRRC LQFEEAPPCA 420 TGERDCSLSS IQEVNNSELP SGTGESKLVK LSYADLKATS KRQMGTSLPP RYGGNSPSTV 480 PKPSGIGLHL NSIVNAAPLV RGTTRSIKLA DHYIGVQVMK SASVMSSHLP DNVRSRSISL 540 NMVEKDSAGP EDRDESETSI TASSAVPQSP HTVVFEHHGP THEKRGFDAE NVDDYEECKQ 600 SSPKKKRKKT SSTKDSDGTK RCNCKKTKCL KLYCDCFAAG VYCAESCACQ GCFNITDYED 660 TVLETRQHIE SRNPLAFAPK IVQHEEEIQF TPSSARHKRG CNCKKSMCLK KYCECYQANV 720 GCSSGCRCDG CKNVYGRKGE YIPIEHGVGK DNVSDKAGKD RIESTFDEKL EMVATKKDIL 780 SAELYNSHNL TPLAPSFQCS DHANNVPKSP CLPTSYLPSP ESDLTIISSY ENSTRSPLRH 840 SESSDILLET SKELSDLGSY NWRVDYDNIG IVDTFSPRCD AAPTTCHITP MSDLCSMAMA 900 SSTSSKTSDW TNASQVQLCP GSHGLSSDSS LHRRSSPVTP MTRLGGTKSF QGLDFENGLY 960 DILQDDTPEI LKDTSTPIRS LKVSSPNKKR VSPPHSHNHE LGASSSGALR SGRKFILKAV 1020 PSFPPLTPCI GSKGGSIIQN MSNLQDKGRK K

Sequence ? help Back to Top

Protein Sequence Length: 1051 aa Download sequence

MDSPEIRKIK ANTTSSSDSP PVQDSPVFSY INNLSPIQPV KASHLAQGFP VLNSPPLVFT  60
SPRINSHRDT SFLKRPQYQP LSSAEKPKTQ DEAKKFLDDP VDPKITQLHM RLITDSQDRE  120
TKIRVESQQC SSSEGVDEYL ADPSEVDCVD STQSASPCLK QSNNVPETFT GSKETTLYDN  180
KHNTGTDLGT EAKAPSEQAK EDLEGKQTFD AKPVKIIEQS DGDLPYDECP NEYLADPSEV  240
DCVDSTQSAS PCLKQSNNVP ETFTGSKETT LYDKKHNTGT DLGTEAKAPS EQAKEDLEGK  300
QTFDAKPVKI IEQSDGDLPY DECPNIESGL SIDNAYKREY RQHLHDQDRG GKHQDDCDHT  360
PQSPPGRLQI VQVYENSAEN VGAISKGMIG NMILHAPKAR SEQGGMHRRC LQFEEAPPCA  420
TGERDCSLSS IQEVNNSELP SGTGESKLVK LSYADLKATS KRQMGTSLPP RYGGNSPSTV  480
PKPSGIGLHL NSIVNAAPLV RGTTRSIKLA DHYIGVQVMK SASVMSSHLP DNVRSRSISL  540
NMVEKDSAGP EDRDESETSI TASSAVPQSP HTVVFEHHGP THEKRGFDAE NVDDYEECKQ  600
SSPKKKRKKT SSTKDSDGTK RCNCKKTKCL KLYCDCFAAG VYCAESCACQ GCFNITDYED  660
TVLETRQHIE SRNPLAFAPK IVQHEEEIQF TPSSARHKRG CNCKKSMCLK KYCECYQANV  720
GCSSGCRCDG CKNVYGRKGE YIPIEHGVGK DNVSDKAGKD RIESTFDEKL EMVATKKDIL  780
SAELYNSHNL TPLAPSFQCS DHANNVPKSP CLPTSYLPSP ESDLTIISSY ENSTRSPLRH  840
SESSDILLET SKELSDLGSY NWRVDYDNIG IVDTFSPRCD AAPTTCHITP MSDLCSMAMA  900
SSTSSKTSDW TNASQVQLCP GSHGLSSDSS LHRRSSPVTP MTRLGGTKSF QGLDFENGLY  960
DILQDDTPEI LKDTSTPIRS LKVSSPNKKR VSPPHSHNHE LGASSSGALR SGRKFILKAV  1020
PSFPPLTPCI GSKGGSIIQN MSNLQDKGRK K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	605	609	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	3e-53	CPP family protein