PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001673.1_g350.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 206aa MW: 21728.6 Da PI: 7.2587

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001673.1_g350.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	52.9	1.5e-16	1	72	35	105
TCP 35 LqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg......kaaksaa.kskksqksaa 105 L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++ +++ +++ + ++ + k+k++++s++ Pav_sc0001673.1_g350.1.mk 1 LTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMsVNGA-------LKIPtsapdpRPGEDPPdKKKRKRNSNS 72 8******************************8888855521111.......1222111212222222212222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
LTRELGHKSD GETIRWLLEH AEPAIIAATG TGTVPAIAMS VNGALKIPTS APDPRPGEDP 60 PDKKKRKRNS NSEYVDLNDG VSASAGLAPL TTERHHQQPP TAAVQAVVPQ GVLPMWAIPS 120 NGVVPGAFFM VPSASTQPHI FTFPTTVAAA PFINISARPI SSFVGPSSAS ATTHMAASTA 180 PQTLRDFSLE IYDKKELQFM SGSSNH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	7e-55	TCP family protein