PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001756.1_g010.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 98aa    MW: 10999.1 Da    PI: 6.138
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001756.1_g010.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.95.6e-091445132
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg 32
                               rg+W +eEd+ l+d++k +G g W+ +a++ g
  Pav_sc0001756.1_g010.1.mk 14 RGAWCAEEDKVLADYIKTHGEGKWSHVAKKTG 45
                               89***************************977 PP
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    
MGRKPSGDKD GQKRGAWCAE EDKVLADYIK THGEGKWSHV AKKTGSYRAS PMIPSHDDHD  60
HDQMVENAAD ATLPGSVRKD HHENSFLRDL DDFINDLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28110.13e-13MYB family protein