PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001769.1_g150.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 269aa    MW: 29407.6 Da    PI: 5.0637
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001769.1_g150.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.41.9e-3076135260
                                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
                       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60 
                                +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ itY  eHnh+k
  Pav_sc0001769.1_g150.1.mk  76 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTMLLITYACEHNHPK 135
                                69*************************998****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MDPKFYRISP FGTDPADPDQ PMTSENGPGS PSSGEETKVA TAPSPKKRRG VQKRVVTVPI  60
GDVEGSKSKG EGHPPSDSWA WRKYGQKPIK GSPYPRGYYR CSSSKGCPAR KQVERSRVDP  120
TMLLITYACE HNHPKPTTKP HQPSTATSPN TEPELPAKTV TPNDEELTIF ASQVDLDLSD  180
NSATLLSDFG WFSDMASTAV LESPICAGNS SCADYDVATR LGDEEDEYLF ADLGELPEGS  240
VFFRHRMVES DEQNRRCSLS VVPCCDSRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.21e-75WRKY family protein